"antibody design" Papers

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dyAb: Flow Matching for Flexible Antibody Design with AlphaFold-driven Pre-binding Antigen

Cheng Tan, Yijie Zhang, Zhangyang Gao et al.

AAAI 2025paperarXiv:2503.01910

FoldToken: Learning Protein Language via Vector Quantization and Beyond

Zhangyang Gao, Cheng Tan, Jue Wang et al.

AAAI 2025paperarXiv:2403.09673

Relation-Aware Equivariant Graph Networks for Epitope-Unknown Antibody Design and Specificity Optimization

Lirong Wu, Haitao Lin, Yufei Huang et al.

AAAI 2025paperarXiv:2501.00013

Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical and Geometric Constraints

Tian Zhu, Milong Ren, Haicang Zhang

GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation

Haitao Lin, Lirong Wu, Yufei Huang et al.

Topological Neural Networks go Persistent, Equivariant, and Continuous

Yogesh Verma, Amauri Souza, Vikas Garg

ICML 2024arXiv:2406.03164