"protein engineering" Papers

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ProSpero: Active Learning for Robust Protein Design Beyond Wild-Type Neighborhoods

Michal Kmicikiewicz, Vincent Fortuin, Ewa Szczurek

NEURIPS 2025arXiv:2505.22494
1
citations

SpecMER: Fast Protein Generation with K-mer Guided Speculative Decoding

Thomas Walton, Darin Tsui, Aryan Musharaf et al.

NEURIPS 2025spotlightarXiv:2509.21689
1
citations

Steering Protein Language Models

Long-Kai Huang, Rongyi Zhu, Bing He et al.

ICML 2025arXiv:2509.07983
3
citations

Variational Search Distributions

Dan Steinberg, Rafael Oliveira, Cheng Soon Ong et al.

ICLR 2025arXiv:2409.06142
5
citations

Evolution-Inspired Loss Functions for Protein Representation Learning

Chengyue Gong, Adam Klivans, James Loy et al.

ICML 2024

Tree Search-Based Evolutionary Bandits for Protein Sequence Optimization

Jiahao Qiu, Hui Yuan, Jinghong Zhang et al.

AAAI 2024paperarXiv:2401.06173
3
citations